MLOC_67779 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains28.032456.994350.554741.7665
LEAShoots from the seedlings (10 cm shoot stage)50.665236.55136.766232.8312
INF1Young developing inflorescences (5mm)104.608109.43298.879277.0679
INF2Developing inflorescences (1-1.5 cm)85.154993.018585.377987.7447
ROORoots from the seedlings (10 cm shoot stage)24.621945.344135.409943.3997
NODDeveloping tillers at six leaf stage, 3rd internode21.582720.886923.507565.5341
CAR5Developing grain, bracts removed (5 DPA)77.437473.918180.031466.7314
CAR15Developing grain, bracts removed (15 DPA)37.452634.095632.373970.7065



CDS Structure of MLOC_67779






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67779.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364055NoneNoneNoneNone
MLOC_67779.1CUST_5544_PI427708080AvailableAvailablecontig_53620 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g07120.1 -2 0.0 2008 1113/1219 (91%) 13102.m00801 protein HEAT repeat family protein, putative, expressed
TAIR PP10 AT2G02560.2 -2 0.0 1676 922/1221 (76%) | Symbols: CAND1, ATCAND1, ETA2, TIP120, HVE | cullin-associated and neddylation dissociated | chr2:690345-697342 FORWARD LENGTH=1217