MLOC_67752 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains495.367378.319471.702448.421
LEAShoots from the seedlings (10 cm shoot stage)6.899017.73137.625836.49701
INF1Young developing inflorescences (5mm)0.127973000.116914
INF2Developing inflorescences (1-1.5 cm)0.7592160.8369670.9817791.02654
ROORoots from the seedlings (10 cm shoot stage)106.01256.622538.276971.0465
NODDeveloping tillers at six leaf stage, 3rd internode1.082142.983195.2065110.9358
CAR5Developing grain, bracts removed (5 DPA)0.3355710.6757720.578860.590579
CAR15Developing grain, bracts removed (15 DPA)0.0354593000.123779



CDS Structure of MLOC_67752






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67752.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249605.1NoneNoneNoneNone
MLOC_67752.1CUST_18357_PI427708080AvailableAvailablecontig_53572 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g15709.1 -3 1e-162 478 251/469 (54%) 13101.m01742 protein transferase family protein, putative
TAIR PP10 AT1G31490.1 -3 9e-66 225 138/446 (31%) HXXXD-type acyl-transferase family protein | chr1:11271744-11273078 REVERSE LENGTH=444