MLOC_67742 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)5.085195.586434.671015.4194
CAR15Developing grain, bracts removed (15 DPA)0.4111060.4137750.2597770.995867



CDS Structure of MLOC_67742






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67742.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67742.2CUST_9118_PI427708083AvailableAvailablecontig_53542 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g08090.2 -2 7e-173 500 251/347 (72%) 13106.m00846 protein heparanase-like protein precursor, putative, expressed
TAIR PP10 AT5G34940.3 -2 1e-137 404 195/348 (56%) | Symbols: AtGUS3, GUS3 | glucuronidase 3 | chr5:13236566-13238718 REVERSE LENGTH=382