MLOC_67736 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.615286.730097.553316.26682
LEAShoots from the seedlings (10 cm shoot stage)11.94945.45935.597067.00423
INF1Young developing inflorescences (5mm)0.357050.5449680.5109080.380321
INF2Developing inflorescences (1-1.5 cm)0.6358620.8172980.4240950.731833
ROORoots from the seedlings (10 cm shoot stage)6.379057.110414.383159.08929
NODDeveloping tillers at six leaf stage, 3rd internode33.496922.808351.175694.8993
CAR5Developing grain, bracts removed (5 DPA)0.5873830.8919930.8094070.783083
CAR15Developing grain, bracts removed (15 DPA)0.4801820.3951110.4626280.951589



CDS Structure of MLOC_67736






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67736.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK253123.1NoneNoneNoneNone
MLOC_67736.2CUST_18356_PI427708080AvailableAvailablecontig_138060 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g41890.1 +3 0.0 685 378/457 (83%) 13108.m04501 protein microtubule associated protein, putative, expressed
TAIR PP10 AT1G27920.1 +3 4e-145 448 264/492 (54%) | Symbols: MAP65-8 | microtubule-associated protein 65-8 | chr1:9727106-9729848 FORWARD LENGTH=562