MLOC_67697 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains26.565650.835748.070242.3527
LEAShoots from the seedlings (10 cm shoot stage)100.66392.20994.580780.7342
INF1Young developing inflorescences (5mm)80.626382.638381.497365.3255
INF2Developing inflorescences (1-1.5 cm)82.5481106.64492.702298.4755
ROORoots from the seedlings (10 cm shoot stage)80.436693.75377.2333106.41
NODDeveloping tillers at six leaf stage, 3rd internode50.740766.745987.6414225.334
CAR5Developing grain, bracts removed (5 DPA)91.542781.886675.305776.2674
CAR15Developing grain, bracts removed (15 DPA)63.204365.448555.6175134.893



CDS Structure of MLOC_67697






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67697.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364830NoneNoneNoneNone
MLOC_67697.1CUST_5532_PI427708080AvailableAvailablecontig_53487 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g15020.1 -2 0.0 1961 988/1128 (88%) 13101.m01662 protein lissencephaly type-1-like homology motif, putative, expressed
TAIR PP10 AT3G16830.1 -2 0.0 1552 801/1146 (70%) | Symbols: TPR2 | TOPLESS-related 2 | chr3:5731709-5737531 FORWARD LENGTH=1131