- Predicted Gene MLOC_67650
MLOC_67650 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.26354 | 6.11469 | 5.92291 | 6.94078 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.263 | 13.8111 | 11.8967 | 11.6313 |
| INF1 | Young developing inflorescences (5mm) | 6.98818 | 5.68557 | 6.37887 | 6.20797 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.056 | 5.79088 | 4.93602 | 6.92393 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.16907 | 2.77292 | 2.44061 | 3.71342 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.04548 | 3.09119 | 3.90388 | 12.4651 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.34301 | 8.14181 | 7.104 | 8.61385 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.97961 | 1.80589 | 1.80821 | 5.12676 |
CDS Structure of MLOC_67650
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_67650.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g46730.2 |
+3 |
7e-162 |
473 |
281/388 (72%) |
13107.m04943 protein PPR repeat domain containing protein, putative, expressed |
| TAIR PP10 |
AT1G01970.1 |
+3 |
2e-95 |
300 |
163/320 (51%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:338538-339905 FORWARD LENGTH=409 |
