MLOC_67639 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.942624.29923.237122.7645
LEAShoots from the seedlings (10 cm shoot stage)20.83259.117069.2583812.3953
INF1Young developing inflorescences (5mm)23.297720.500920.017518.4992
INF2Developing inflorescences (1-1.5 cm)20.721223.076121.18324.7031
ROORoots from the seedlings (10 cm shoot stage)7.4106516.159310.420719.9359
NODDeveloping tillers at six leaf stage, 3rd internode17.868517.675312.577866.6832
CAR5Developing grain, bracts removed (5 DPA)33.886732.27632.427233.423
CAR15Developing grain, bracts removed (15 DPA)18.590715.070517.952339.1907



CDS Structure of MLOC_67639






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67639.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364844NoneNoneNoneNone
MLOC_67639.2CUST_5524_PI427708080AvailableAvailablecontig_53395 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g38950.2 -2 0.0 1082 632/827 (76%) 13105.m04099 protein TBC domain containing protein, expressed
TAIR PP10 AT3G55020.1 -2 0.0 715 437/734 (60%) Ypt/Rab-GAP domain of gyp1p superfamily protein | chr3:20389278-20394713 REVERSE LENGTH=777