MLOC_67631 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains22.562218.246315.17716.6692
LEAShoots from the seedlings (10 cm shoot stage)15.984112.078616.619210.6302
INF1Young developing inflorescences (5mm)16.596920.772220.930515.8215
INF2Developing inflorescences (1-1.5 cm)15.339518.573212.980916.8273
ROORoots from the seedlings (10 cm shoot stage)31.689818.041814.912519.2828
NODDeveloping tillers at six leaf stage, 3rd internode21.384739.544751.1234100.015
CAR5Developing grain, bracts removed (5 DPA)10.447912.334311.035910.5939
CAR15Developing grain, bracts removed (15 DPA)2.859643.000393.318617.09354



CDS Structure of MLOC_67631






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67631.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67631.1CUST_15140_PI427708080AvailableAvailablecontig_53391 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g40320.1 -3 4e-22 97 90/137 (66%) 13107.m04190 protein vesicle transport protein GOT1B, putative, expressed
TAIR PP10 AT5G43070.1 -3 3e-12 65 40/92 (43%) | Symbols: WPP1 | WPP domain protein 1 | chr5:17289259-17289726 REVERSE LENGTH=155