MLOC_6761 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.087680.622171.480340
LEAShoots from the seedlings (10 cm shoot stage)01.4005900
INF1Young developing inflorescences (5mm)5.048011.92452.264392.09985
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)2.927651.9272401.23816
NODDeveloping tillers at six leaf stage, 3rd internode0.4976180.5980720.02090990
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.21754400.05311740.204117



CDS Structure of MLOC_6761






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_6761.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_6761.1CUST_9096_PI427708083AvailableAvailablecontig_138059 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g43800.1 -1 2e-31 120 56/58 (97%) 13104.m04357 protein phenylalanine ammonia-lyase, putative, expressed
TAIR PP10 AT3G53260.1 -1 7e-23 95 44/58 (76%) | Symbols: PAL2, ATPAL2 | phenylalanine ammonia-lyase 2 | chr3:19744256-19746619 REVERSE LENGTH=717