MLOC_67609 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.04141560.037201900.0500252
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.360010.4668270.5728390.553897
NODDeveloping tillers at six leaf stage, 3rd internode0.05904410.2255251.961291.69763
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_67609






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67609.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67609.1CUST_9095_PI427708083AvailableAvailablecontig_53352 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g05840.2 +3 2e-161 463 260/319 (82%) 13101.m00569 protein oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed
TAIR PP10 AT5G02540.1 +3 8e-125 370 203/318 (64%) NAD(P)-binding Rossmann-fold superfamily protein | chr5:568609-570720 FORWARD LENGTH=331