MLOC_67585 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.040594600.0842932
ROORoots from the seedlings (10 cm shoot stage)00.057329700.341812
NODDeveloping tillers at six leaf stage, 3rd internode00.015747500.168426
CAR5Developing grain, bracts removed (5 DPA)0.1050930.2911410.1082940.219373
CAR15Developing grain, bracts removed (15 DPA)0.09594820.1039670.07081920.263558



CDS Structure of MLOC_67585






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67585.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67585.1CUST_9089_PI427708083AvailableAvailablecontig_53302 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g42900.1 -1 1e-133 399 190/269 (71%) 13104.m04246 protein expressed protein
TAIR PP10 AT1G60790.1 -1 4e-100 306 139/264 (53%) | Symbols: TBL2 | Plant protein of unknown function (DUF828) | chr1:22380193-22382216 REVERSE LENGTH=541