MLOC_67584 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains38.917326.758528.63730.4118
LEAShoots from the seedlings (10 cm shoot stage)7.324277.336145.228775.61502
INF1Young developing inflorescences (5mm)16.128113.258815.065112.5905
INF2Developing inflorescences (1-1.5 cm)20.087815.293221.104620.3292
ROORoots from the seedlings (10 cm shoot stage)27.022415.579635.393923.1745
NODDeveloping tillers at six leaf stage, 3rd internode8.427646.488557.8972920.5213
CAR5Developing grain, bracts removed (5 DPA)18.258520.318719.557119.5544
CAR15Developing grain, bracts removed (15 DPA)1.335931.787691.355853.63165



CDS Structure of MLOC_67584






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67584.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67584.1CUST_15130_PI427708080AvailableAvailablecontig_53302 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g42910.1 +1 2e-26 99 46/68 (68%) 13104.m04247 protein expressed protein
TAIR PP10 AT5G01350.1 +1 2e-15 69 31/59 (53%) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:145865-146911 REVERSE LENGTH=72