MLOC_67581 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.004980.8339420.5675070.86367
LEAShoots from the seedlings (10 cm shoot stage)16.51242.237710.8314725.83547
INF1Young developing inflorescences (5mm)0.4869840.3253830.3872840.359501
INF2Developing inflorescences (1-1.5 cm)0.5727720.3496980.814150.609479
ROORoots from the seedlings (10 cm shoot stage)42.31045.930643.2669813.9896
NODDeveloping tillers at six leaf stage, 3rd internode00.005356370.03217850.0594843
CAR5Developing grain, bracts removed (5 DPA)2.338471.718821.991322.05531
CAR15Developing grain, bracts removed (15 DPA)44.721748.812640.1329109.375



CDS Structure of MLOC_67581






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67581.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372760NoneNoneNoneNone
MLOC_67581.1CUST_5519_PI427708080AvailableAvailablecontig_53297 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g11910.2 -3 0.0 999 509/580 (88%) 13103.m12945 protein DnaK family protein, putative, expressed
TAIR PP10 AT2G32120.2 -3 0.0 734 369/582 (63%) | Symbols: HSP70T-2 | heat-shock protein 70T-2 | chr2:13651720-13653411 REVERSE LENGTH=563