MLOC_67565 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.21782.761663.530212.94609
LEAShoots from the seedlings (10 cm shoot stage)2.352971.680661.696431.63526
INF1Young developing inflorescences (5mm)5.033626.389836.014014.33072
INF2Developing inflorescences (1-1.5 cm)5.201224.646966.062315.17253
ROORoots from the seedlings (10 cm shoot stage)1.109272.855382.776052.98964
NODDeveloping tillers at six leaf stage, 3rd internode1.21612.009782.7476.97283
CAR5Developing grain, bracts removed (5 DPA)4.9036.006666.183725.07527
CAR15Developing grain, bracts removed (15 DPA)1.363331.701681.337992.97516



CDS Structure of MLOC_67565






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67565.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67565.1CUST_15128_PI427708080AvailableAvailablecontig_53273 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g53630.1 -2 6e-103 271 135/243 (56%) 13101.m05617 protein ulp1 protease family protein, putative, expressed
TAIR PP10 AT1G10570.2 -2 5e-67 229 109/243 (45%) | Symbols: OTS2, ULP1C | Cysteine proteinases superfamily protein | chr1:3487639-3491102 FORWARD LENGTH=570