MLOC_67557 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.376421.314641.454161.50537
LEAShoots from the seedlings (10 cm shoot stage)2.210031.990652.824231.83385
INF1Young developing inflorescences (5mm)1.952671.791042.677671.53558
INF2Developing inflorescences (1-1.5 cm)2.012432.284392.303642.09084
ROORoots from the seedlings (10 cm shoot stage)1.31651.758651.655321.76185
NODDeveloping tillers at six leaf stage, 3rd internode2.625643.096123.710829.70354
CAR5Developing grain, bracts removed (5 DPA)3.155743.207523.555762.72295
CAR15Developing grain, bracts removed (15 DPA)1.213520.9574391.060562.17167



CDS Structure of MLOC_67557






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67557.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67557.1CUST_13020_PI427708083AvailableAvailablecontig_53266 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g01900.1 -2 3e-62 122 57/131 (44%) 13112.m00107 protein retrotransposon protein, putative, unclassified, expressed
TAIR PP10 AT5G20960.2 +2 6e-49 186 92/130 (71%) | Symbols: AAO1, AO1, ATAO, AT-AO1, AOalpha, AtAO1 | aldehyde oxidase 1 | chr5:7116783-7122338 FORWARD LENGTH=1368