MLOC_67531 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains249.215230.528240.611248.745
LEAShoots from the seedlings (10 cm shoot stage)547.131911.248314.131494.954
INF1Young developing inflorescences (5mm)51.792434.388329.241735.3995
INF2Developing inflorescences (1-1.5 cm)38.362374.8847106.36384.4909
ROORoots from the seedlings (10 cm shoot stage)165.269246.12148.935265.164
NODDeveloping tillers at six leaf stage, 3rd internode2.128052.462781.801046.50999
CAR5Developing grain, bracts removed (5 DPA)658.134735.901770.055765.834
CAR15Developing grain, bracts removed (15 DPA)13.051613.87197.0375131.3923



CDS Structure of MLOC_67531






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67531.6
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251594.1NoneNoneNoneNone
MLOC_67531.6CUST_5515_PI427708080AvailableAvailablecontig_53232 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g01590.1 +2 0.0 704 353/600 (59%) 13102.m00080 protein glycosyl hydrolases, putative, expressed
TAIR PP10 AT1G12240.1 +2 0.0 541 292/599 (49%) | Symbols: ATBETAFRUCT4, VAC-INV | Glycosyl hydrolases family 32 protein | chr1:4153699-4157457 FORWARD LENGTH=664