MLOC_67513 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.891147.4689210.0058.31765
LEAShoots from the seedlings (10 cm shoot stage)7.991074.836784.862764.90189
INF1Young developing inflorescences (5mm)7.051758.702388.435776.73856
INF2Developing inflorescences (1-1.5 cm)6.734447.950317.128797.87723
ROORoots from the seedlings (10 cm shoot stage)1.547580.8254921.249461.09724
NODDeveloping tillers at six leaf stage, 3rd internode4.573026.372998.1309820.544
CAR5Developing grain, bracts removed (5 DPA)5.5545.609885.280775.17553
CAR15Developing grain, bracts removed (15 DPA)1.883561.698731.577694.00255



CDS Structure of MLOC_67513






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67513.6
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369074NoneNoneNoneNone
MLOC_67513.6CUST_5511_PI427708080AvailableAvailablecontig_53209 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g73900.1 +1 0.0 704 350/397 (88%) 13101.m08066 protein DEAD-box ATP-dependent RNA helicase, putative, expressed
TAIR PP10 AT5G19210.2 +1 0.0 530 254/396 (64%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:6461444-6463687 FORWARD LENGTH=472