MLOC_67497 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.958821.701917.361421.9388
LEAShoots from the seedlings (10 cm shoot stage)9.077923.366173.619524.91
INF1Young developing inflorescences (5mm)31.272534.372532.526729.6018
INF2Developing inflorescences (1-1.5 cm)36.425444.141634.69145.8833
ROORoots from the seedlings (10 cm shoot stage)7.4829812.92368.9700115.9064
NODDeveloping tillers at six leaf stage, 3rd internode1.090611.427910.7740574.91498
CAR5Developing grain, bracts removed (5 DPA)23.270822.892118.721922.8999
CAR15Developing grain, bracts removed (15 DPA)4.182553.737553.578449.6682



CDS Structure of MLOC_67497






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67497.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356995NoneNoneNoneNone
MLOC_67497.2CUST_5510_PI427708080AvailableAvailablecontig_53177 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g46290.1 -1 0.0 953 486/552 (88%) 13105.m04935 protein T-complex protein, putative, expressed
TAIR PP10 AT3G13860.1 -1 0.0 780 388/546 (71%) | Symbols: HSP60-3A | heat shock protein 60-3A | chr3:4561704-4565133 REVERSE LENGTH=572