MLOC_67496 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.926718.514577.794257.40674
LEAShoots from the seedlings (10 cm shoot stage)4.98443.03683.293083.48046
INF1Young developing inflorescences (5mm)26.402625.082823.413221.758
INF2Developing inflorescences (1-1.5 cm)17.46118.654619.239720.6843
ROORoots from the seedlings (10 cm shoot stage)3.20456.332396.602666.70077
NODDeveloping tillers at six leaf stage, 3rd internode1.641261.13272.892295.42751
CAR5Developing grain, bracts removed (5 DPA)8.555469.27758.463668.7968
CAR15Developing grain, bracts removed (15 DPA)1.868811.464341.629674.10519



CDS Structure of MLOC_67496






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67496.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67496.1CUST_13016_PI427708083AvailableAvailablecontig_53177 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g46270.1 -1 9e-53 188 92/101 (91%) 13105.m04933 protein FEN1A - Putative flap endonuclease protein, expressed
TAIR PP10 AT5G26680.2 -1 1e-49 180 88/101 (87%) 5-3 exonuclease family protein | chr5:9311882-9315458 REVERSE LENGTH=383