- Predicted Gene MLOC_67495
MLOC_67495 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.87431 | 6.72037 | 5.25462 | 7.87233 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.52805 | 8.10874 | 9.82818 | 5.74606 |
INF1 | Young developing inflorescences (5mm) | 2.12251 | 1.8094 | 2.18674 | 1.96246 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.81771 | 2.57718 | 3.20005 | 3.05217 |
ROO | Roots from the seedlings (10 cm shoot stage) | 12.857 | 9.84389 | 11.6744 | 13.9826 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.87954 | 6.92665 | 13.6421 | 21.9813 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.95918 | 9.18029 | 6.66657 | 8.92854 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.40479 | 1.0153 | 0.826012 | 3.10006 |
CDS Structure of MLOC_67495
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_67495.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g46280.1 |
+2 |
3e-57 |
187 |
94/105 (90%) |
13105.m04934 protein expressed protein |
TAIR PP10 |
AT4G29660.1 |
+2 |
3e-27 |
105 |
56/89 (63%) |
| Symbols: EMB2752 | embryo defective 2752 | chr4:14534495-14535171 REVERSE LENGTH=103 |