MLOC_67495 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.874316.720375.254627.87233
LEAShoots from the seedlings (10 cm shoot stage)2.528058.108749.828185.74606
INF1Young developing inflorescences (5mm)2.122511.80942.186741.96246
INF2Developing inflorescences (1-1.5 cm)1.817712.577183.200053.05217
ROORoots from the seedlings (10 cm shoot stage)12.8579.8438911.674413.9826
NODDeveloping tillers at six leaf stage, 3rd internode4.879546.9266513.642121.9813
CAR5Developing grain, bracts removed (5 DPA)5.959189.180296.666578.92854
CAR15Developing grain, bracts removed (15 DPA)1.404791.01530.8260123.10006



CDS Structure of MLOC_67495






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67495.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357233NoneNoneNoneNone
MLOC_67495.1CUST_5509_PI427708080AvailableAvailablecontig_53177 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g46280.1 +2 3e-57 187 94/105 (90%) 13105.m04934 protein expressed protein
TAIR PP10 AT4G29660.1 +2 3e-27 105 56/89 (63%) | Symbols: EMB2752 | embryo defective 2752 | chr4:14534495-14535171 REVERSE LENGTH=103