MLOC_67489 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.426292.019183.01852.5424
LEAShoots from the seedlings (10 cm shoot stage)10.349828.512250.644626.0705
INF1Young developing inflorescences (5mm)2.323533.249043.307922.70633
INF2Developing inflorescences (1-1.5 cm)2.582643.737896.471644.67897
ROORoots from the seedlings (10 cm shoot stage)2.608464.924541.500145.20722
NODDeveloping tillers at six leaf stage, 3rd internode1.231391.230651.336153.86959
CAR5Developing grain, bracts removed (5 DPA)13.880917.259715.504816.4081
CAR15Developing grain, bracts removed (15 DPA)7.791018.234697.3631120.0923



CDS Structure of MLOC_67489






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67489.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251265.1NoneNoneNoneNone
MLOC_67489.1CUST_5508_PI427708080AvailableAvailablecontig_53170 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g43650.2 +3 0.0 637 327/372 (88%) 13104.m04339 protein L-allo-threonine aldolase, putative, expressed
TAIR PP10 AT1G08630.4 +3 2e-163 476 237/349 (68%) | Symbols: THA1 | threonine aldolase 1 | chr1:2743948-2745685 REVERSE LENGTH=358