MLOC_67488 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.25375.299326.499245.26832
LEAShoots from the seedlings (10 cm shoot stage)4.245992.855612.277442.68558
INF1Young developing inflorescences (5mm)10.20329.2344610.01218.45214
INF2Developing inflorescences (1-1.5 cm)8.664757.166396.814258.55658
ROORoots from the seedlings (10 cm shoot stage)2.95864.006675.310754.93937
NODDeveloping tillers at six leaf stage, 3rd internode0.1054470.1219230.5049270.624862
CAR5Developing grain, bracts removed (5 DPA)3.547084.435443.796734.05123
CAR15Developing grain, bracts removed (15 DPA)3.448842.181282.185556.5657



CDS Structure of MLOC_67488






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67488.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67488.2CUST_13015_PI427708083AvailableAvailablecontig_53164 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g36774.1 -3 1e-47 175 83/105 (79%) 13108.m03864 protein zinc finger family protein, putative, expressed
TAIR PP10 AT5G22480.1 -3 7e-35 137 60/90 (67%) ZPR1 zinc-finger domain protein | chr5:7451643-7456168 REVERSE LENGTH=493