MLOC_67477 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3326690.7485081.001360.614188
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.0343481000.0336453
INF2Developing inflorescences (1-1.5 cm)0.01392760.02600300.0268199
ROORoots from the seedlings (10 cm shoot stage)0.7443250.7907470.6603190.856031
NODDeveloping tillers at six leaf stage, 3rd internode0.01613520.01261490.005076080.0363378
CAR5Developing grain, bracts removed (5 DPA)0.0336677000.059281
CAR15Developing grain, bracts removed (15 DPA)000.02829490.027789



CDS Structure of MLOC_67477






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67477.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67477.1CUST_15109_PI427708080AvailableAvailablecontig_53141 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g04110.1 +2 0.0 864 472/866 (55%) 13110.m00330 protein MLA6 protein, putative, expressed
TAIR PP10 AT3G46730.1 +2 2e-64 235 192/684 (28%) NB-ARC domain-containing disease resistance protein | chr3:17213069-17215612 REVERSE LENGTH=847