MLOC_67471 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains32.315524.097432.310330.2598
LEAShoots from the seedlings (10 cm shoot stage)75.713355.374977.18259.1511
INF1Young developing inflorescences (5mm)4.676094.527954.554754.22168
INF2Developing inflorescences (1-1.5 cm)6.011396.386256.917527.53141
ROORoots from the seedlings (10 cm shoot stage)85.1288106.44677.4879122.621
NODDeveloping tillers at six leaf stage, 3rd internode67.2467125.42258.9173337.977
CAR5Developing grain, bracts removed (5 DPA)159.548161.701149.298165.784
CAR15Developing grain, bracts removed (15 DPA)6.388046.273438.3346717.7898



CDS Structure of MLOC_67471






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67471.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249470.1NoneNoneNoneNone
MLOC_67471.3CUST_426_PI427708083AvailableAvailablecontig_53133 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g24600.1 +2 1e-158 438 227/289 (79%) 13104.m02304 protein cysteine proteinase 1 precursor, putative, expressed
TAIR PP10 AT4G16190.1 +2 9e-121 337 187/287 (65%) Papain family cysteine protease | chr4:9171512-9172877 FORWARD LENGTH=373