MLOC_67422 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains126.047158.155165.968148.23
LEAShoots from the seedlings (10 cm shoot stage)51.3569.63168.448952.2841
INF1Young developing inflorescences (5mm)10.62913.53039.685829.25457
INF2Developing inflorescences (1-1.5 cm)4.832044.769774.248384.89175
ROORoots from the seedlings (10 cm shoot stage)43.598769.964164.147876.4717
NODDeveloping tillers at six leaf stage, 3rd internode46.125224.65129.276978.9083
CAR5Developing grain, bracts removed (5 DPA)45.862145.566950.360443.0268
CAR15Developing grain, bracts removed (15 DPA)4.538345.015174.7756310.4001



CDS Structure of MLOC_67422






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67422.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251622.1NoneNoneNoneNone
MLOC_67422.1CUST_5493_PI427708080AvailableAvailablecontig_53069 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g51380.2 -3 0.0 947 476/488 (98%) 13101.m05361 protein ATP synthase, putative, expressed
TAIR PP10 AT4G38510.5 -3 0.0 929 471/488 (97%) ATPase, V1 complex, subunit B protein | chr4:18011155-18014897 REVERSE LENGTH=494