MLOC_67420 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.740412.358912.800712.4493
LEAShoots from the seedlings (10 cm shoot stage)24.053834.202834.391626.287
INF1Young developing inflorescences (5mm)13.344811.78412.48310.9844
INF2Developing inflorescences (1-1.5 cm)12.753412.025315.172314.1248
ROORoots from the seedlings (10 cm shoot stage)37.361437.550728.769243.7705
NODDeveloping tillers at six leaf stage, 3rd internode9.8743411.036615.295429.1145
CAR5Developing grain, bracts removed (5 DPA)11.643310.015210.698210.591
CAR15Developing grain, bracts removed (15 DPA)9.621518.311068.1081721.2031



CDS Structure of MLOC_67420






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67420.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368943NoneNoneNoneNone
MLOC_67420.1CUST_5492_PI427708080AvailableAvailablecontig_53065 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g71000.1 -3 0.0 768 416/492 (85%) 13101.m07730 protein protein kinase APK1B, chloroplast precursor, putative, expressed
TAIR PP10 AT5G18610.2 -3 0.0 623 335/475 (71%) Protein kinase superfamily protein | chr5:6192736-6195371 FORWARD LENGTH=513