MLOC_67418 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.331221.223819.843821.6235
LEAShoots from the seedlings (10 cm shoot stage)8.972830.9431020.6841813.29101
INF1Young developing inflorescences (5mm)61.301848.895235.038744.0929
INF2Developing inflorescences (1-1.5 cm)37.8852.125439.039854.4706
ROORoots from the seedlings (10 cm shoot stage)1.863637.071916.510029.10478
NODDeveloping tillers at six leaf stage, 3rd internode0.4364760.3430010.5340431.56947
CAR5Developing grain, bracts removed (5 DPA)22.083918.597717.038220.9424
CAR15Developing grain, bracts removed (15 DPA)1.607221.403971.557513.82339



CDS Structure of MLOC_67418






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67418.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375365NoneNoneNoneNone
MLOC_67418.1CUST_5491_PI427708080AvailableAvailablecontig_53063 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g67100.1 -3 0.0 606 334/515 (65%) 13101.m07275 protein expressed protein
TAIR PP10 AT1G65470.2 -3 5e-93 319 199/482 (41%) | Symbols: FAS1 | chromatin assembly factor-1 (FASCIATA1) (FAS1) | chr1:24319906-24323879 REVERSE LENGTH=807