MLOC_67396 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.133813.758713.066514.5685
LEAShoots from the seedlings (10 cm shoot stage)27.243425.759626.37223.2319
INF1Young developing inflorescences (5mm)15.595513.988115.18413.4602
INF2Developing inflorescences (1-1.5 cm)11.10229.4090211.365912.1582
ROORoots from the seedlings (10 cm shoot stage)6.622859.1412411.060711.4706
NODDeveloping tillers at six leaf stage, 3rd internode12.445811.863416.822342.3137
CAR5Developing grain, bracts removed (5 DPA)12.176311.673811.409412.4378
CAR15Developing grain, bracts removed (15 DPA)1.644971.799962.092434.56437



CDS Structure of MLOC_67396






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67396.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368731NoneNoneNoneNone
MLOC_67396.4CUST_5488_PI427708080AvailableAvailablecontig_53033 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g37820.1 -2 2e-122 365 189/244 (77%) 13101.m03846 protein oxidoreductase/ transition metal ion binding protein, putative, expressed
TAIR PP10 AT4G29400.1 -2 1e-80 257 126/206 (61%) Protein of unknown function (DUF3531) | chr4:14466350-14467980 FORWARD LENGTH=302