MLOC_67383 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.037922.555921.381219.4219
LEAShoots from the seedlings (10 cm shoot stage)29.51223.024620.418318.986
INF1Young developing inflorescences (5mm)14.828315.651615.298812.0107
INF2Developing inflorescences (1-1.5 cm)7.305378.123316.408517.58097
ROORoots from the seedlings (10 cm shoot stage)4.278777.37218.976467.44397
NODDeveloping tillers at six leaf stage, 3rd internode9.135416.9176810.745820.3198
CAR5Developing grain, bracts removed (5 DPA)11.014914.200312.003111.2703
CAR15Developing grain, bracts removed (15 DPA)1.22360.6406320.9923792.15509



CDS Structure of MLOC_67383






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67383.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67383.2CUST_13011_PI427708083AvailableAvailablecontig_53015 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g18210.1 -3 4e-47 164 100/151 (66%) 13101.m01978 protein peptidyl-prolyl cis-trans isomerase, putative, expressed
TAIR PP10 AT3G62030.3 -3 2e-32 124 57/83 (69%) | Symbols: ROC4 | rotamase CYP 4 | chr3:22973708-22975139 FORWARD LENGTH=259