MLOC_6738 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 16.9494 | 23.2575 | 20.8185 | 21.6309 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 745.995 | 1274.06 | 1241.61 | 870.585 |
| INF1 | Young developing inflorescences (5mm) | 59.074 | 54.574 | 72.6972 | 56.3106 |
| INF2 | Developing inflorescences (1-1.5 cm) | 86.2734 | 46.7269 | 61.2051 | 74.0512 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.03215 | 11.8436 | 26.7172 | 14.961 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 333.071 | 271.53 | 448.93 | 806.543 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 132.633 | 165.631 | 130.383 | 151.771 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 12.9867 | 17.2327 | 13.5268 | 38.0044 |
CDS Structure of MLOC_6738
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6738.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g05480.1 |
+3 |
9e-77 |
233 |
118/130 (91%) |
13107.m00503 protein photosystem I reaction center subunit, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT1G30380.1 |
+3 |
6e-53 |
171 |
87/125 (70%) |
| Symbols: PSAK | photosystem I subunit K | chr1:10722325-10723013 FORWARD LENGTH=130 |
