MLOC_67373 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3099720.1779440.2676630.23624
LEAShoots from the seedlings (10 cm shoot stage)00.16810.07057980.131284
INF1Young developing inflorescences (5mm)00.04551210.05511010.0729985
INF2Developing inflorescences (1-1.5 cm)0.072018800.04839040.0853767
ROORoots from the seedlings (10 cm shoot stage)0.1741540.34078400.529583
NODDeveloping tillers at six leaf stage, 3rd internode0.08121160.101550.2045840.383529
CAR5Developing grain, bracts removed (5 DPA)0.042566700.04760510.0749369
CAR15Developing grain, bracts removed (15 DPA)0.2810420.443540.2069470.709784



CDS Structure of MLOC_67373






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67373.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67373.2CUST_9067_PI427708083AvailableAvailablecontig_52985 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g20590.1 -2 1e-124 369 187/332 (56%) 13102.m02304 protein MBTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain
TAIR PP10 AT3G06190.1 -2 3e-79 253 144/352 (41%) | Symbols: ATBPM2, BPM2 | BTB-POZ and MATH domain 2 | chr3:1874577-1876575 REVERSE LENGTH=406