MLOC_67371 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2753420.3231810.3539310.363312
LEAShoots from the seedlings (10 cm shoot stage)60.4204145.59597.024790.2387
INF1Young developing inflorescences (5mm)00.02422380.05225030.0620592
INF2Developing inflorescences (1-1.5 cm)0.08586130.04104470.1297130.106165
ROORoots from the seedlings (10 cm shoot stage)0.06029570.09733010.2152130.141284
NODDeveloping tillers at six leaf stage, 3rd internode11.804414.652921.547950.0698
CAR5Developing grain, bracts removed (5 DPA)16.630121.178318.93822.6742
CAR15Developing grain, bracts removed (15 DPA)1.938813.52132.203437.55575



CDS Structure of MLOC_67371






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67371.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252375.1NoneNoneNoneNone
MLOC_67371.1CUST_5483_PI427708080AvailableAvailablecontig_52982 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g29170.1 -3 5e-164 475 293/390 (75%) 13108.m03013 protein dehydrogenase, putative, expressed
TAIR PP10 AT1G23740.1 -3 6e-150 438 248/313 (79%) Oxidoreductase, zinc-binding dehydrogenase family protein | chr1:8398245-8399656 REVERSE LENGTH=386