MLOC_6737 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains23.050822.206422.44118.7292
LEAShoots from the seedlings (10 cm shoot stage)12.66876.535116.914356.72929
INF1Young developing inflorescences (5mm)13.375312.985715.69019.20198
INF2Developing inflorescences (1-1.5 cm)10.908614.351613.052111.6181
ROORoots from the seedlings (10 cm shoot stage)20.249325.331724.126824.0558
NODDeveloping tillers at six leaf stage, 3rd internode44.793762.806461.8461176.891
CAR5Developing grain, bracts removed (5 DPA)4.183064.151313.976753.22056
CAR15Developing grain, bracts removed (15 DPA)1.77961.355051.027582.78134



CDS Structure of MLOC_6737






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_6737.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_6737.1CUST_9066_PI427708083AvailableAvailablecontig_138022 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g05470.1 +2 1e-53 195 104/149 (70%) 13107.m00501 protein AIR9 protein, putative, expressed
TAIR PP10 AT2G34680.1 +2 2e-40 157 81/148 (55%) | Symbols: AIR9 | Outer arm dynein light chain 1 protein | chr2:14616947-14628300 REVERSE LENGTH=1708