MLOC_67334 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.11212.074212.181422.10569
LEAShoots from the seedlings (10 cm shoot stage)1.998391.782512.281881.68923
INF1Young developing inflorescences (5mm)5.49285.457644.814084.38747
INF2Developing inflorescences (1-1.5 cm)4.552324.00144.477954.67175
ROORoots from the seedlings (10 cm shoot stage)2.210142.381292.922152.9073
NODDeveloping tillers at six leaf stage, 3rd internode0.4140440.2719780.7228211.06511
CAR5Developing grain, bracts removed (5 DPA)3.121183.171813.38493.02798
CAR15Developing grain, bracts removed (15 DPA)1.286661.140210.677522.55095



CDS Structure of MLOC_67334






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67334.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355334NoneNoneNoneNone
MLOC_67334.1CUST_5480_PI427708080AvailableAvailablecontig_52910 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g42110.1 -3 0.0 736 443/549 (81%) 13104.m04146 protein cell division control protein 48 homolog B, putative, expressed
TAIR PP10 AT2G03670.1 -3 0.0 590 361/536 (67%) | Symbols: CDC48B | cell division cycle 48B | chr2:1117595-1120361 FORWARD LENGTH=603