MLOC_67295 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains37.794238.480738.506744.9377
LEAShoots from the seedlings (10 cm shoot stage)31.06324.756725.138725.9646
INF1Young developing inflorescences (5mm)84.162190.027791.380480.5379
INF2Developing inflorescences (1-1.5 cm)63.676265.508170.062579.6425
ROORoots from the seedlings (10 cm shoot stage)12.491123.311827.179932.9157
NODDeveloping tillers at six leaf stage, 3rd internode19.832519.828330.047383.3509
CAR5Developing grain, bracts removed (5 DPA)40.066444.287644.351248.5237
CAR15Developing grain, bracts removed (15 DPA)16.5716.888915.056241.0409



CDS Structure of MLOC_67295






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67295.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252456.1NoneNoneNoneNone
MLOC_67295.3CUST_5476_PI427708080AvailableAvailablecontig_52849 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g31520.1 +1 0.0 552 308/357 (86%) 13110.m02741 protein ribosomal RNA assembly protein mis3, putative, expressed
TAIR PP10 AT5G08420.1 +1 1e-157 458 254/358 (71%) RNA-binding KH domain-containing protein | chr5:2713555-2716064 FORWARD LENGTH=391