- Predicted Gene MLOC_67295
MLOC_67295 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 37.7942 | 38.4807 | 38.5067 | 44.9377 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 31.063 | 24.7567 | 25.1387 | 25.9646 |
INF1 | Young developing inflorescences (5mm) | 84.1621 | 90.0277 | 91.3804 | 80.5379 |
INF2 | Developing inflorescences (1-1.5 cm) | 63.6762 | 65.5081 | 70.0625 | 79.6425 |
ROO | Roots from the seedlings (10 cm shoot stage) | 12.4911 | 23.3118 | 27.1799 | 32.9157 |
NOD | Developing tillers at six leaf stage, 3rd internode | 19.8325 | 19.8283 | 30.0473 | 83.3509 |
CAR5 | Developing grain, bracts removed (5 DPA) | 40.0664 | 44.2876 | 44.3512 | 48.5237 |
CAR15 | Developing grain, bracts removed (15 DPA) | 16.57 | 16.8889 | 15.0562 | 41.0409 |
CDS Structure of MLOC_67295
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_67295.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g31520.1 |
+1 |
0.0 |
552 |
308/357 (86%) |
13110.m02741 protein ribosomal RNA assembly protein mis3, putative, expressed |
TAIR PP10 |
AT5G08420.1 |
+1 |
1e-157 |
458 |
254/358 (71%) |
RNA-binding KH domain-containing protein | chr5:2713555-2716064 FORWARD LENGTH=391 |