MLOC_67264 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.547561.332812.771671.5771
LEAShoots from the seedlings (10 cm shoot stage)3.436442.245582.940632.15525
INF1Young developing inflorescences (5mm)1.342221.296070.8903691.01472
INF2Developing inflorescences (1-1.5 cm)1.420261.358831.351631.44583
ROORoots from the seedlings (10 cm shoot stage)1.90372.653934.517862.82368
NODDeveloping tillers at six leaf stage, 3rd internode3.961342.802317.612777.93493
CAR5Developing grain, bracts removed (5 DPA)1.774421.303731.477081.41707
CAR15Developing grain, bracts removed (15 DPA)0.9392181.448850.5322812.50095



CDS Structure of MLOC_67264






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67264.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67264.1CUST_9050_PI427708083AvailableAvailablecontig_528 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g31830.2 +1 2e-16 74 39/49 (80%) 13110.m02777 protein ras-related protein, putative, expressed
TAIR PP10 AT3G09910.3 +1 6e-11 59 30/46 (65%) | Symbols: RABC2b | RAB GTPase homolog C2B | chr3:3036864-3038121 REVERSE LENGTH=205