MLOC_67256 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains37.149453.905445.237548.0159
LEAShoots from the seedlings (10 cm shoot stage)18.26172.368632.411366.7893
INF1Young developing inflorescences (5mm)152.375138.586109.825114.261
INF2Developing inflorescences (1-1.5 cm)113.551123.152103.536127.113
ROORoots from the seedlings (10 cm shoot stage)11.084528.817327.427831.8559
NODDeveloping tillers at six leaf stage, 3rd internode0.480250.3919490.08518641.18018
CAR5Developing grain, bracts removed (5 DPA)50.719345.964241.247545.0016
CAR15Developing grain, bracts removed (15 DPA)5.194195.139514.6626311.6575



CDS Structure of MLOC_67256






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67256.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357899NoneNoneNoneNone
MLOC_67256.3CUST_5467_PI427708080AvailableAvailablecontig_52790 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g36390.1 -2 0.0 1427 770/841 (92%) 13101.m03685 protein MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed
TAIR PP10 AT2G16440.1 -2 0.0 1102 577/843 (68%) | Symbols: MCM4 | Minichromosome maintenance (MCM2/3/5) family protein | chr2:7126536-7130665 REVERSE LENGTH=847