MLOC_67247 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains100.38692.170891.799392.7002
LEAShoots from the seedlings (10 cm shoot stage)10.67526.312459.896017.26833
INF1Young developing inflorescences (5mm)4.507033.254274.965833.70952
INF2Developing inflorescences (1-1.5 cm)2.05581.528481.702071.95312
ROORoots from the seedlings (10 cm shoot stage)55.374537.856524.462240.9834
NODDeveloping tillers at six leaf stage, 3rd internode17.67136.255062.1327713.9145
CAR5Developing grain, bracts removed (5 DPA)20.969219.035521.345419.9737
CAR15Developing grain, bracts removed (15 DPA)2.317972.301892.747825.94276



CDS Structure of MLOC_67247






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67247.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252822.1NoneNoneNoneNone
MLOC_67247.3CUST_5464_PI427708080AvailableAvailablecontig_52779 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g42234.1 -1 0.0 794 450/503 (89%) 13101.m04336 protein amino acid permease family protein, putative, expressed
TAIR PP10 AT2G01170.1 -1 0.0 640 368/502 (73%) | Symbols: BAT1 | bidirectional amino acid transporter 1 | chr2:102364-104462 REVERSE LENGTH=516