MLOC_67216 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.423790.3729510.4889910.380849
LEAShoots from the seedlings (10 cm shoot stage)1.22772.37011.97531.42367
INF1Young developing inflorescences (5mm)0.1034790.1102640.04288460.0724749
INF2Developing inflorescences (1-1.5 cm)0.095607000.116759
ROORoots from the seedlings (10 cm shoot stage)11.064314.482313.817914.447
NODDeveloping tillers at six leaf stage, 3rd internode00.010243100.0831529
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.1872090.1199520.2737140.382306



CDS Structure of MLOC_67216






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67216.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368003NoneNoneNoneNone
MLOC_67216.3CUST_5458_PI427708080AvailableAvailablecontig_52734 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g11354.1 +2 0.0 658 339/482 (70%) 13110.m01034 protein MATE efflux family protein, putative, expressed
TAIR PP10 AT5G52450.1 +2 2e-180 520 273/460 (59%) MATE efflux family protein | chr5:21289042-21291749 REVERSE LENGTH=486