MLOC_67213 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains90.905194.789189.375485.5287
LEAShoots from the seedlings (10 cm shoot stage)28.02941.144631.23524.6253
INF1Young developing inflorescences (5mm)20.096418.946318.749517.1393
INF2Developing inflorescences (1-1.5 cm)4.780098.16096.450557.52296
ROORoots from the seedlings (10 cm shoot stage)114.84459.121353.192862.2402
NODDeveloping tillers at six leaf stage, 3rd internode24.551319.446727.60250.5566
CAR5Developing grain, bracts removed (5 DPA)148.769158.958131.859146.597
CAR15Developing grain, bracts removed (15 DPA)13.393316.521112.348837.2325



CDS Structure of MLOC_67213






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67213.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371694NoneNoneNoneNone
MLOC_67213.1CUST_5457_PI427708080AvailableAvailablecontig_52730 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g40360.1 +3 0.0 653 361/435 (83%) 13110.m03738 protein proline oxidase, mitochondrial precursor, putative, expressed
TAIR PP10 AT5G38710.1 +3 2e-137 417 223/431 (52%) Methylenetetrahydrofolate reductase family protein | chr5:15501340-15503899 FORWARD LENGTH=476