MLOC_67201 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.236713.115314.178715.7279
LEAShoots from the seedlings (10 cm shoot stage)5.518232.001252.332522.76002
INF1Young developing inflorescences (5mm)54.838760.936370.236661.7827
INF2Developing inflorescences (1-1.5 cm)36.175234.761235.174744.5464
ROORoots from the seedlings (10 cm shoot stage)14.636411.39215.909315.6127
NODDeveloping tillers at six leaf stage, 3rd internode2.468171.754335.457787.80125
CAR5Developing grain, bracts removed (5 DPA)13.860115.426513.844616.5605
CAR15Developing grain, bracts removed (15 DPA)2.554851.392032.249585.44747



CDS Structure of MLOC_67201






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67201.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376067NoneNoneNoneNone
MLOC_67201.4CUST_5455_PI427708080AvailableAvailablecontig_52709 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g51970.1 +2 3e-180 529 348/479 (73%) 13103.m05661 protein growth-regulating factor, putative, expressed
TAIR PP10 AT4G37740.1 +2 1e-44 169 81/124 (65%) | Symbols: AtGRF2, GRF2 | growth-regulating factor 2 | chr4:17725533-17727609 REVERSE LENGTH=535