- Predicted Gene MLOC_67194
MLOC_67194 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 35.4878 | 33.2487 | 34.9699 | 32.5411 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 23.5281 | 25.8497 | 25.3743 | 19.8627 |
| INF1 | Young developing inflorescences (5mm) | 37.5926 | 44.4394 | 42.2008 | 33.7517 |
| INF2 | Developing inflorescences (1-1.5 cm) | 40.8072 | 46.0474 | 43.9565 | 44.6606 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 47.8023 | 43.8885 | 50.0841 | 49.0654 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 22.9009 | 26.3091 | 25.6235 | 74.1658 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 41.6939 | 46.0719 | 35.571 | 37.8182 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.81228 | 6.75736 | 8.33348 | 16.5344 |
CDS Structure of MLOC_67194
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_67194.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g17280.1 |
-1 |
1e-126 |
370 |
212/246 (86%) |
13102.m01928 protein gamma-secretase subunit APH-1B, putative, expressed |
| TAIR PP10 |
AT2G31440.1 |
-1 |
3e-96 |
291 |
162/247 (66%) |
INVOLVED IN: positive regulation of catalytic activity, protein processing; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aph-1 (InterPro:IPR009294); Has 268 Blast hits to 262 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 212; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). | chr2:13399309-13400971 REVERSE LENGTH=250 |