- Predicted Gene MLOC_67170
MLOC_67170 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.479772 | 0.568912 | 1.00418 | 0.647832 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.48243 | 1.05311 | 1.36224 | 0.841907 |
| INF1 | Young developing inflorescences (5mm) | 1.59774 | 1.68878 | 1.94398 | 1.53805 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.04917 | 1.36716 | 1.05033 | 1.38176 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.325864 | 1.09817 | 1.15271 | 1.17995 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.207072 | 0.523561 | 2.30095 | 2.69161 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.757755 | 0.872618 | 0.750563 | 0.82413 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.625683 | 0.960284 | 0.954997 | 2.0344 |
CDS Structure of MLOC_67170
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_67170.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g30974.1 |
+1 |
1e-45 |
171 |
106/239 (44%) |
13102.m03387 protein expressed protein |
| TAIR PP10 |
AT1G28120.1 |
+1 |
6e-14 |
73 |
62/230 (27%) |
CONTAINS InterPro DOMAIN/s: Ovarian tumour, otubain (InterPro:IPR003323), Ubiquitin thioesterase Otubain (InterPro:IPR016615), Peptidase C65, otubain (InterPro:IPR019400); Has 413 Blast hits to 411 proteins in 139 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 83; Plants - 88; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). | chr1:9813219-9815143 REVERSE LENGTH=306 |