MLOC_6715 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 40.8289 | 46.8194 | 53.5877 | 48.6268 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 113.813 | 57.2506 | 54.4448 | 68.616 |
| INF1 | Young developing inflorescences (5mm) | 32.3017 | 24.5962 | 26.8635 | 23.847 |
| INF2 | Developing inflorescences (1-1.5 cm) | 16.6692 | 17.9889 | 19.5196 | 20.3556 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.54327 | 6.26404 | 9.38055 | 7.82881 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 45.231 | 28.0933 | 24.4196 | 102.472 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 32.0687 | 32.5761 | 32.2873 | 33.7809 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.57623 | 3.4943 | 3.32822 | 8.12251 |
CDS Structure of MLOC_6715
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6715.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g32730.1 |
+3 |
2e-138 |
404 |
222/272 (82%) |
13101.m03299 protein tetratricopeptide repeat containing protein, putative, expressed |
| TAIR PP10 |
AT3G14110.2 |
+3 |
6e-93 |
283 |
152/219 (69%) |
| Symbols: FLU | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:4676222-4677010 REVERSE LENGTH=232 |
