MLOC_67141 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5718330.8951540.5041140.790336
LEAShoots from the seedlings (10 cm shoot stage)0.8424083.894448.940244.42042
INF1Young developing inflorescences (5mm)0.5170220.5402740.7110420.515485
INF2Developing inflorescences (1-1.5 cm)0.9604050.797510.7906880.974465
ROORoots from the seedlings (10 cm shoot stage)0.6927021.580721.925272.02348
NODDeveloping tillers at six leaf stage, 3rd internode1.18641.299611.007274.70155
CAR5Developing grain, bracts removed (5 DPA)0.6034410.5107680.7849990.639684
CAR15Developing grain, bracts removed (15 DPA)0.1830070.2886830.134720.520267



CDS Structure of MLOC_67141






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67141.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67141.1CUST_15072_PI427708080AvailableAvailablecontig_52617 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g71270.1 +2 0.0 700 369/436 (85%) 13101.m07762 protein eukaryotic peptide chain release factor subunit 1-1, putative, expressed
TAIR PP10 AT5G47880.2 +2 0.0 647 338/436 (78%) | Symbols: ERF1-1 | eukaryotic release factor 1-1 | chr5:19386555-19387865 REVERSE LENGTH=436