MLOC_67138 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)00.4571510.09242070.175124
INF1Young developing inflorescences (5mm)0.24776000.245152
INF2Developing inflorescences (1-1.5 cm)00.092265200.105143
ROORoots from the seedlings (10 cm shoot stage)54.658575.378518.663658.1653
NODDeveloping tillers at six leaf stage, 3rd internode00.014167800.105043
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)00.1373800.230514



CDS Structure of MLOC_67138






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67138.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67138.1CUST_9037_PI427708083AvailableAvailablecontig_52613 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g32050.1 -2 0.0 559 289/356 (81%) 13104.m03065 protein transposon protein, putative, unclassified, expressed
TAIR PP10 AT3G27020.1 -2 3e-166 486 241/355 (68%) | Symbols: YSL6 | YELLOW STRIPE like 6 | chr3:9961623-9964461 REVERSE LENGTH=676