MLOC_67085 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3815990.4597260.3027150.416549
LEAShoots from the seedlings (10 cm shoot stage)1.131585.755357.748114.12091
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.02784950.03790080.068627
ROORoots from the seedlings (10 cm shoot stage)1.759392.045811.739072.35042
NODDeveloping tillers at six leaf stage, 3rd internode00.01684081.101361.02013
CAR5Developing grain, bracts removed (5 DPA)00.033258200.0427334
CAR15Developing grain, bracts removed (15 DPA)00.03196710.08497170.157903



CDS Structure of MLOC_67085






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67085.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371605NoneNoneNoneNone
MLOC_67085.2CUST_5441_PI427708080AvailableAvailablecontig_52549 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g45890.1 +2 5e-61 203 125/236 (53%) 13106.m04844 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT1G14600.1 +2 2e-21 94 43/65 (66%) Homeodomain-like superfamily protein | chr1:5001185-5003370 REVERSE LENGTH=255