MLOC_67079 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.333991.000330.5782150.602795
LEAShoots from the seedlings (10 cm shoot stage)0.7619760.5215961.813470.684412
INF1Young developing inflorescences (5mm)0.5856290.8332541.533960.757926
INF2Developing inflorescences (1-1.5 cm)1.504741.387431.126581.39835
ROORoots from the seedlings (10 cm shoot stage)0.5009760.2849690.4393570.294411
NODDeveloping tillers at six leaf stage, 3rd internode1.122531.787643.548234.35047
CAR5Developing grain, bracts removed (5 DPA)0.3169620.351470.4101530.315427
CAR15Developing grain, bracts removed (15 DPA)0.03946370.1411540.1120430.246767



CDS Structure of MLOC_67079






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67079.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67079.1NoneAvailableAvailablecontig_52536 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g33480.1 +3 2e-19 90 41/48 (85%) 13109.m03327 protein DAG protein, chloroplast precursor, putative, expressed
TAIR PP10 AT3G15000.1 +3 2e-14 75 33/44 (75%) cobalt ion binding | chr3:5050321-5052121 FORWARD LENGTH=395