MLOC_67067 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains175.011157.749174.529168.622
LEAShoots from the seedlings (10 cm shoot stage)220.564156.718167.941149.421
INF1Young developing inflorescences (5mm)11.523610.364214.190210.7194
INF2Developing inflorescences (1-1.5 cm)9.772138.9007114.485212.1326
ROORoots from the seedlings (10 cm shoot stage)510.19362.938244.724422.14
NODDeveloping tillers at six leaf stage, 3rd internode448.472655.7799.7651996.23
CAR5Developing grain, bracts removed (5 DPA)38.034337.527241.282339.992
CAR15Developing grain, bracts removed (15 DPA)22.033322.322919.755154.333



CDS Structure of MLOC_67067






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67067.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356545NoneNoneNoneNone
MLOC_67067.2CUST_5439_PI427708080AvailableAvailablecontig_52512 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g41650.3 -1 0.0 1271 671/718 (93%) 13102.m04599 protein phenylalanine ammonia-lyase, putative, expressed
TAIR PP10 AT2G37040.1 -1 0.0 1012 526/694 (76%) | Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 | chr2:15557602-15560237 REVERSE LENGTH=725