MLOC_67061 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)00.1546400.114839
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.065108200.101902
ROORoots from the seedlings (10 cm shoot stage)000.2739330.0888055
NODDeveloping tillers at six leaf stage, 3rd internode00.011663100.101805
CAR5Developing grain, bracts removed (5 DPA)53.617291.843640.800661.7475
CAR15Developing grain, bracts removed (15 DPA)0.3388690.4462010.5015940.925449



CDS Structure of MLOC_67061






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_67061.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_67061.1CUST_15059_PI427708080AvailableAvailablecontig_52504 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g59440.1 +2 5e-51 168 91/169 (54%) 13103.m06525 protein dirigent, putative, expressed
TAIR PP10 AT2G21110.1 +2 9e-35 125 71/159 (45%) Disease resistance-responsive (dirigent-like protein) family protein | chr2:9050290-9050850 REVERSE LENGTH=186